[AMBER] Regarding area calculation of protein cavity

From: Athena N <athena.nas01.gmail.com>
Date: Thu, 28 Oct 2021 16:42:15 +0530


I have two different ligands binding to same pocket of protein spanned by 4
amino acids. The second ligand lose some contacts with the amino acids. One
ligand is a core molecule and the second has a bulkier side chain. I want
to know if it possible to get the area occupied by the ligand1 and ligand
2. Kindly help.

Thank you in advance.
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Received on Thu Oct 28 2021 - 04:30:02 PDT
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