[AMBER] Building Forcefield for Glycolipid Molecule

From: Razil Tahir <raziltahir.hotmail.com>
Date: Sun, 18 Jul 2021 17:02:45 +0000

Hello experts,
I'm currently trying to build a forcefield for a glycolipid molecule. I'm using the GLYCAM forcefield for the sugar headgroup but there's no parameter for the alkyl chain.
I've calculated the partial charges using Gaussian09 and took the parameters for the alkyl chain from the GAFF forcefield.
Is this method practical and correct to be used? Please advise.

Thank you.

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Received on Sun Jul 18 2021 - 10:30:02 PDT
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