[AMBER] Creating a coordinate bond in Leap

From: Jenny 148 <jenny.rs140.gmail.com>
Date: Sat, 17 Oct 2020 10:23:54 +0530

Hi,
I have a pdb structure, where in I have added a few zinc ions. These zinc
ions are supposed to be coordinated with a few of the Amino acids. Since I
added the ions by simple superimposition, the coordinate bond is not well
defined and the ions are far from the expected position. Is there some way
to change the position of these ions in xleap and create the coordinate
bond required in this system? Thank you in advance.
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Received on Fri Oct 16 2020 - 22:00:03 PDT
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