Thanks for the reply.
Now the problem has been resolved.
I deleted tar files and again installed without any error.
On Tue, 22 Sep 2020, 6:31 pm Elvis Martis, <elvis_bcp.elvismartis.in> wrote:
> Hi
> I could install ambertools18 and ambertools20 in ubuntu 20.04 (windows WSL)
> with any issues.
> I would suggest deleting the amber20 folder and untar it again and retry
> compiling.
> Best Regards
> Elvis
>
>
>
> On Tue, 22 Sep 2020 at 18:14, David A Case <david.case.rutgers.edu> wrote:
>
> > On Tue, Sep 22, 2020, Nisha Amarnath Jonniya wrote:
> >
> > >I am using ubuntu 20.04.1 , 64-bit and a gnu compiler.
> > >
> > >> > *This is the content of the log file:*
> > >> >
> > >> > config.status: error: in
> > >> > `/home/nisha/software/amber/amber18/AmberTools/src/netcdf-4.6.1':
> > >> > config.status: error: Something went wrong bootstrapping makefile
> > >> fragments
> > >> > for automatic dependency tracking. Try re-running configure with
> > the
> > >> > '--disable-dependency-tracking' option to at least be able to
> build
> > >> > the package (albeit without support for automatic dependency
> > >> tracking).
> >
> > Wow...I've never seen this error before. Just to be complete here, what
> > is the result of typing "gcc --version"?
> >
> > Do you have the ability to try to build Amber on a different machine?
> >
> > It would be great if someone on the list has the time to try to build
> > amber18 on Ubunutu 20.04. But I'm guessing that this error is going to
> > be hard to reproduce. I configure netCDF the "old" way on Ubuntu20.04
> > all the time, and have not encountered this problem.
> >
> > Note: in order to try the fix recommended in the error message above,
> > you would need to edit the $AMBERHOME/AmberTools/src/configure2 script,
> > find the place where netcdf is configured, and add the suggested flag
> > there. Then, re-run configure from $AMBERHOME.
> >
> > ....regards...dac
> >
> >
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> >
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Received on Tue Sep 22 2020 - 06:30:03 PDT
