Re: [AMBER] Amber20 installation

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Tue, 7 Jul 2020 08:48:48 -0400

Hi,

On Wed, Jul 1, 2020 at 2:16 PM Kliuchnikov, Evgenii
<Evgenii_Kliuchnikov.student.uml.edu> wrote:
> /home/klyuchnikov/amber20_src/AmberTools/src/cpptraj/src/DataIO_RemLog.cpp:799:68: sorry, unimplemented: unexpected ast of kind ltgt_expr

This is a compiler bug, and should go away if you use the more
up-to-date compiler. Not sure why cmake isn't picking up the more
recent gcc. Try "update-alternatives --query gcc" to see what the
default gcc is set to and change if needed. Alternatively, you can try
the legacy 'configure' script and see if that works for you.

Good luck,

-Dan

> /home/klyuchnikov/amber20_src/AmberTools/src/cpptraj/src/DataIO_RemLog.cpp:799: confused by earlier errors, bailing out
> Preprocessed source stored into /tmp/cc0rnp9j.out file, please attach this to your bugreport.
> ERROR: Cannot create report: [Errno 17] File exists: '/var/crash/_usr_lib_gcc_x86_64-linux-gnu_4.6_cc1plus.1005.crash'
> make[2]: *** [AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_cuda.dir/DataIO_RemLog.cpp.o] Error 1
> make[1]: *** [AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_cuda.dir/all] Error 2
> make: *** [all] Error 2
>
> Can you please help me to understand what is the reason of the error?
>
> Thank you,
> Evgenii
>
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Received on Tue Jul 07 2020 - 06:00:04 PDT
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