Dear all,
Thank you for all your suggestions...😊
-Chetna
On Wed 1 Jul, 2020, 1:56 PM Raman Preet Singh, <ramanpreetsingh.hotmail.com>
wrote:
> Chetna, when you load your trajectory in VMD, move the graphical display
> to your desired pose and select Toggle Fixed. You may just click F written
> in front of the trajectory and your protein is fixed. In representations,
> go to trajectory tab where you can play around with values to smooth the
> video, the default is set to zero. Increasing to 6 or 8 smoothes the videos
> in my systems and might vary in yours - just play around with it.
>
> Go through the VMD tutorial, it provides dumb easy instructions to follow.
>
> Best,
> Raman
>
> Get Outlook for Android<https://aka.ms/ghei36>
>
> ________________________________
> From: Carlos Simmerling <carlos.simmerling.gmail.com>
> Sent: Wednesday, July 1, 2020 4:10:47 PM
> To: AMBER Mailing List <amber.ambermd.org>
> Subject: Re: [AMBER] how to create nice animated videos to show simulations
>
> You will probably get more help on the VMD email list, or looking at their
> tutorials. A good start is to learn the rmsd trajectory tool that will keep
> your peptide centered. You can also do that using cpptraj in Amber, but for
> videos it might just be easier to do it all in VMD.
>
> On Wed, Jul 1, 2020, 6:31 AM Chetna Tyagi <cheta231.gmail.com> wrote:
>
> > Dear all,
> >
> > Can anyone direct me how to create nice animation videos for my
> > simulations?
> >
> > Using VMD I can not control many aspects of how the final video will look
> > like.
> > The peptide moves in every direction (in the solvent box) and it is not
> > good to be used in a presentation.
> >
> > Is it possible to keep the peptide static, fixed to one point while the
> > structural changes can be observed smoothly.
> >
> > Like in this example, https://www.youtube.com/watch?v=B4sS1iIp-Qk the
> view
> > of the peptides remains static and fixed.
> >
> > Any help or ideas are appreciated and much needed.
> >
> > --
> > Best wishes
> > Chetna
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Received on Wed Jul 01 2020 - 05:30:03 PDT
