Re: [AMBER] Sequence command to build the 4 - O glucuronuxylans chain

From: Hector A. Baldoni <hbaldoni.unsl.edu.ar>
Date: Sun, 5 Apr 2020 15:52:44 -0300 (ARGSL-ST)

Hi Pinky,

You can build your polisaccharide ussing the follwing webserver:
http://glycam.org/docs/forcefield/glycam-naming-2/
http://glycam.org/old/AMBER/

Your hemicellulose will be somethik like this:

DXylpb1-4DXylpb1-4DXylpb1-OH

Hoppe this help you.
Greeting,
Hector.



> Hi Amber Users,
>
>
> I want to build a chain of hemicellulose (amorphus).
>
>
> So, what will be the sequence command of 4-O glucuronuxylans (
> hemicellulose )?
>
>
> Could you please answer my question?
>
> Thank you.
>
> --
> Pinky
> UA
> AL,US
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>


--------------------------------------
 Dr. Hector A. Baldoni
 Profesor Titular (FQByF-UNSL)
 Investigador Adjunto (IMASL-CONICET)
 Area de Quimica General e Inorganica
 Universidad Nacional de San Luis
 Chacabuco 917 (D5700BWS)
 San Luis - Argentina
 hbaldoni at unsl dot edu dot ar
 Tel.:+54-(0)266-4520300 ext. 6157
--------------------------------------



_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Apr 05 2020 - 12:00:02 PDT
Custom Search