Re: [AMBER] AmberTools on Ubuntu 19.04: compilation

From: David A Case <david.case.rutgers.edu>
Date: Tue, 10 Mar 2020 08:25:52 -0400

On Tue, Mar 10, 2020, emanuele falbo wrote:
>
>After having update ubuntu to 19.04, I am facing an issue with AmberTools19
>compilation.
>Essentially, I get the following error from a file sh.f90, which I assume
>that's not being compiled.
>However, when I try to find it ,"$ find $AMBERHOME -iname sh.f90" ,the file
>is not in the Amber directory.
>
>Do you have any idea about how I should go on ? Thanks for the help
>
>SFX= BINDIR=/home/emanuele/amber18/bin sh patch.sh

Very odd. Please try this:

In $AMBERHOME/AmberTools/antechamber/Makefile, find these lines:

dispatch:
     SFX=$(SFX) BINDIR=$(BINDIR) sh patch.sh

Try changing the "sh patch.sh" part to "/bin/bash patch.sh"

Let us know what happens.

...thx...dac


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Received on Tue Mar 10 2020 - 05:30:02 PDT
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