Re: [AMBER] Does anyone here use a99SB-disp force field and how did you obtain it?

From: Anthony Cruz-Balberdy <anthonycruzpr.gmail.com>
Date: Thu, 23 Jan 2020 07:56:36 -0500

Hi Homeo,

Some times the changes that the author made to the force field are not
substantial and instead of providing a package with the force field they
provide a table with the changes that they made so you can make the changes
and generate the new force field.
This is the case here. Look in the SI for the table with the parameters
that were changed then make the changes to the base (a99SB-ILDN) force
field that they used.

Regards,

Anthony

On Thu, Jan 23, 2020 at 5:45 AM Homeo Morphism <homeo.morphizm.gmail.com>
wrote:

> a99SB-disp is a force field that is said to predict both folded and
> disordered protein states equally well. I refer anyone interested to this
> article: https://www.pnas.org/content/115/21/E4758
>
> But how does one obtain this force field?
>
> I went through the entire article looking for a link, but found none.
> Googling doesn't help either - all I get is similar questions asking where
> to get it at researchgate, etc.
>
> Thanks.
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Received on Thu Jan 23 2020 - 05:00:02 PST
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