[AMBER] Membrane simulation with PSM

From: cpimenta <cpimenta.itqb.unl.pt>
Date: Wed, 15 Jan 2020 19:09:24 +0000


I am working with a lipid bilayer containing different lipid types
including PSM. I used charmmlipid2amber.py and successfully converted
from charmm format to amber. PSM is converted to PA, SM and SA
(charmmlipid2amber.csv) but SM and SA residues are not listed in lipid14
or lipid17.

How should I proceed? Should I parameterize the lipid (PSM)?

Best regards,

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Received on Wed Jan 15 2020 - 11:30:02 PST
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