Dear experts,
I have successfully installed cpu and mpi-cpu version of amber 18. However, for cuda installation I am getting the following error:
/usr/local/cuda-9.2//bin/nvcc -gencode arch=compute_30,code=sm_30 -gencode arch=compute_35,code=sm_35 -gencode arch=compute_37,code=sm_37 -gencode arch=compute_50,code=sm_50 -gencode arch=compute_52,code=sm_52 -gencode arch=compute_53,code=sm_53 -gencode arch=compute_60,code=sm_60 -gencode arch=compute_61,code=sm_61 -gencode arch=compute_60,code=sm_70, -gencode arch=compute_61,code=sm_70 -Wno-deprecated-declarations -use_fast_math -O3 -Duse_SPFP -DCUDA -DGTI -I/usr/local/cuda-9.2//include -IB40C --std c++11 -c gti_cuda.cusimulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
simulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
simulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
simulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
simulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
simulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
simulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
simulationConst.h(12): warning: extern declaration of the entity cSim is treated as a static definition
/usr/local/cuda-9.2//bin/nvcc -gencode arch=compute_30,code=sm_30 -gencode arch=compute_35,code=sm_35 -gencode arch=compute_37,code=sm_37 -gencode arch=compute_50,code=sm_50 -gencode arch=compute_52,code=sm_52 -gencode arch=compute_53,code=sm_53 -gencode arch=compute_60,code=sm_60 -gencode arch=compute_61,code=sm_61 -gencode arch=compute_60,code=sm_70, -gencode arch=compute_61,code=sm_70 -Wno-deprecated-declarations -use_fast_math -O3 -Duse_SPFP -DCUDA -DGTI -I/usr/local/cuda-9.2//include -IB40C --std c++11 -c gti_global.cu
gti_global.cu:7:24: error: redefinition of ‘simulationConst cSim’
__constant__ simulationConst cSim;
^
simulationConst.h:12:24: error: ‘simulationConst cSim’ previously declared here
extern __constant__ simulationConst cSim;
^
make[5]: *** [gti_global.o] Error 1
make[5]: Leaving directory `/home/sandip/software/amber18/src/pmemd/src/cuda'
make[4]: *** [cuda_spfp_libs] Error 2
make[4]: Leaving directory `/home/sandip/software/amber18/src/pmemd/src'
make[3]: *** [cuda_SPFP] Error 2
make[3]: Leaving directory `/home/sandip/software/amber18/src/pmemd/src'
make[2]: *** [cuda_serial] Error 2
make[2]: Leaving directory `/home/sandip/software/amber18/src/pmemd'
make[1]: *** [cuda_serial] Error 2
make[1]: Leaving directory `/home/sandip/software/amber18/src'
make: *** [install] Error 2
Thanks and Regards,
Saikat Pal
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Received on Mon Dec 23 2019 - 06:00:04 PST
