Re: [AMBER] Amber not working after installation - Help from github

From: Elvis Martis <elvis_bcp.elvismartis.in>
Date: Fri, 13 Sep 2019 19:19:31 +0530

Alright. What is the output when you type
which sander??
Best Regards



On Fri, 13 Sep 2019 at 18:37, <charalamm.cheng.auth.gr> wrote:

> Elvis, yes I did. Thanks for replying
>
> Quoting Elvis Martis <elvis_bcp.elvismartis.in>:
>
> > He
> > Did you try
> > source $AMBERHOME/amber.sh or amber.csh ??
> > Best Regards
> >
> >
> >
> > On Fri, 13 Sep 2019 at 15:31, <charalamm.cheng.auth.gr> wrote:
> >
> >> Dear all,
> >>
> >> After installing Amber18 and AmberTools19 Amber commands did't run.
> >>
> >> To make them work we did run the following:
> >>
> >> $ source $AMBERHOME/miniconda/bin/activate
> >> $ pip install parmed
> >> $ pip install git+https://github.com/amber-md/pdb4amber
> >>
> >> Is this normal?
> >>
> >> Thank you very much!
> >> Charalampos
> >>
> >>
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>
>
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Received on Fri Sep 13 2019 - 07:00:01 PDT
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