Re: [AMBER] building amber 16 parallel with MPI

From: Gustaf Olsson <gustaf.olsson.lnu.se>
Date: Wed, 28 Aug 2019 05:43:39 +0000

What system/OS are you installing on and what is returned by

    echo $0

as well as

    echo $DO_PARALLEL

after you run

> export DO_PARALLEL=”mpirun -np 2

and finally:

    which mpirun

Best regards
// Gustaf

> On 27 Aug 2019, at 18:57, Sadaf Rani <sadafrani6.gmail.com> wrote:
>
> Dear Amber
> I am trying to compile amber 16 in parallel with MPI
> I did following:-
> cd $AMBERHOME
> ./configure -mpi gnu
> make install
> when I do
> export DO_PARALLEL=”mpirun -np 2”
> it does not work or either give :-
> `-np': not a valid identifier
> bash: export: `2”': not a valid identifier
>
> I have already installed MPI as mentioned in the link:-
> https://jetcracker.wordpress.com/2012/03/01/how-to-install-mpi-in-ubuntu/
>
> Path of mpicc and mpif90 are already given in .bashrc and .profile files
>
> Could any one suggest me where I am doing wrong?
>
> thank you
>
> Sadaf
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Received on Tue Aug 27 2019 - 23:00:02 PDT
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