Hi All,
I want to ask how (or if) I should change the method for calculating area
per lipid for a POPC membrane with the transmembrane helix when the number
of lipids on the leaflets differs (on the upper leaflet I have 65 lipids,
while on the lower leaflet I have 66 lipids).
Normally, I calculate it with: Area per lipid = (box X dimension)*(box Y
dimension)/ number of lipids per layer (steps described in the Amber
Lipid14 tutorial).
Thank you in advance
Maria
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Received on Tue Jul 23 2019 - 02:30:02 PDT
