Re: [AMBER] preparing a new pdb

From: Boutheïna KERKENI <>
Date: Sun, 7 Apr 2019 11:56:11 +0100

> Hello amberusers
> I have a cartesian coordinates file mainly composed of water molecules and an organic molecule, I need to know how to create the pdb file in such a way my atoms can be read easily (at the moment I have created one PDB with vmd however all the water atoms have same name and this caused xleap to consider them only once for OW and HW), I have all necessary parameters in a frcmod file.
> Thank you
> Regards
> Boutheina

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Received on Sun Apr 07 2019 - 04:00:03 PDT
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