[AMBER] How to load and visualize large trajectories?

From: Chetna Tyagi <cheta231.gmail.com>
Date: Wed, 9 Jan 2019 13:22:29 +0100

Dear all,

This is not specifically an AMBER question but I would like to ask how can
we visualize large trajectories?

I carried out three separate accelerated MD runs of 500 ns each. I want to
see how my peptide eventually interacts with the lipid bilayer.
When I load it in VMD for visualization, the program just stops with an
error like "Can't load any more frames".

Is it a problem with VMD or that my computer's memory (16 GB) is
insufficient? I could not find similar errors on VMD help forums.

What are some other software or tools to visualize this? How did you solve
this problem?
Thank you for any suggestions..
Best wishes
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Received on Wed Jan 09 2019 - 05:00:02 PST
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