Dear colleagues,
I wonder if you can help me with installation issues.
After installing Ambertools18, I then installed cuda-9.1 (because cuda-10 was not compatible with amber18) and then started (./configure -cuda gnu).
When I did the (make install), there was a conflict in gcc compiler compatibility as shown in the log below. Unfortunately cuda-9.1 automatically updates the compiler to gcc-7.
I looking forward to hearing from you,
kindly,
Yazan
/usr/local/cuda-9.1/bin/nvcc -gencode arch=compute_30,code=sm_30 -gencode arch=compute_50,code=sm_50 -gencode arch=compute_52,code=sm_52 -gencode arch=compute_53,code=sm_53 -gencode arch=compute_60,code=sm_60 -gencode arch=compute_61,code=sm_61 -gencode arch=compute_60,code=sm_70 -Wno-deprecated-declarations -use_fast_math -O3 -ccbin g++ -o cuda_mg_wrapper.o -c cuda_mg_wrapper.cu
In file included from /usr/local/cuda-9.1/bin/../targets/x86_64-linux/include/host_config.h:50:0,
from /usr/local/cuda-9.1/bin/../targets/x86_64-linux/include/cuda_runtime.h:78,
from <command-line>:0:
/usr/local/cuda-9.1/bin/../targets/x86_64-linux/include/crt/host_config.h:121:2: error: #error -- unsupported GNU version! gcc versions later than 6 are not supported!
#error -- unsupported GNU version! gcc versions later than 6 are not supported!
^~~~~
Makefile:175: recipe for target 'cuda_mg_wrapper.o' failed
make[2]: *** [cuda_mg_wrapper.o] Error 1
make[2]: Leaving directory '/home/yazan/amber18/AmberTools/src/pbsa'
Makefile:446: recipe for target 'cuda_serial' failed
make[1]: *** [cuda_serial] Error 2
make[1]: Leaving directory '/home/yazan/amber18/AmberTools/src'
Makefile:7: recipe for target 'install' failed
make: *** [install] Error 2
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Received on Mon Jan 07 2019 - 08:30:02 PST
