[AMBER] Amber18 compilation error on a Linux CPU cluster

From: Sundar <jubilantsundar.gmail.com>
Date: Wed, 19 Dec 2018 23:47:23 -0600

Dear Amber users,

I'm trying to install Amber18 on a CPU cluster.
Any step-by-step installation guide on how to successfully compile it?
"./configure gnu" fails with the following error message.

Checking NetCDF...
    Using bundled NetCDF library.
    Starting NetCDF build.
    Configuring NetCDF C interface (may be time-consuming)...
    Compiling the NetCDF C interface (may be time-consuming)...
Error: NetCDF C compile failed.
       Check
/user/tools/amber18/amber18/AmberTools/src/netcdf-4.3.0/netcdf.c.compile.log
       for errors.
Configure failed due to the errors above!

Following are the error lines in the "netcdf.c.compile.log"

make[1]: *** [ncgen3] Error 2
make[1]: Leaving directory
`user/tools/amber18/amber18/AmberTools/src/netcdf-4.3.0/ncgen3'
make: *** [install-recursive] Error 1


-- 
Thanks,
Jubilant
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Dec 19 2018 - 22:00:04 PST
Custom Search