Got it. It’s working after the using the file from the link you gave. The
fist file was downloaded from the home page hence, I assumed that is the
latest (possible I got the old file by mistake ) . Thanks a lot for you
kind advise.
On Tue, 18 Dec 2018 at 12:27 AM Alan <alanwilter.gmail.com> wrote:
> David is saying you're using an old ACPYPE version, please get the latest
> version from here:
>
> https://github.com/alanwilter/acpype
>
> On Mon, 17 Dec 2018 at 13:20, Seketoulie Keretsu <sekekeretsu.gmail.com>
> wrote:
>
>> Dear David A Chase,
>>
>> I apologise but i cannot really follow what you're saying.
>> Should i change the "parmchk" to "parmchk2" in the acpype.py script ??
>>
>> Thank you. - Seke
>>
>> On Mon, Dec 17, 2018 at 10:13 PM David A Case <david.case.rutgers.edu>
>> wrote:
>> >
>> > On Mon, Dec 17, 2018, Seketoulie Keretsu wrote:
>> > >
>> > >Thank you for the response. I have executed the environment setup
>> > >script (sanders, tleap etc can be called from console). I noticed in
>> > >the error report that "parmchk" has failed.
>> >
>> > That script needs to be updated: we have not included a "parmchk"
>> > executable for some time. "parmchk2" should be a drop-in substitute.
>> >
>> > ....dac
>> >
>> >
>> > _______________________________________________
>> > AMBER mailing list
>> > AMBER.ambermd.org
>> > http://lists.ambermd.org/mailman/listinfo/amber
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
> --
> Alan Wilter SOUSA da SILVA, DSc
> Senior Bioinformatician, UniProt
> European Bioinformatics Institute (EMBL-EBI)
> European Molecular Biology Laboratory
> Wellcome Trust Genome Campus
> Hinxton
> Cambridge CB10 1SD
> United Kingdom
> Tel: +44 (0)1223 494588
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Dec 17 2018 - 08:30:02 PST
