Re: [AMBER] Minimisation and periodic boundaries

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Mon, 10 Dec 2018 09:37:06 -0500

Hi,

I don't see why you would ever turn PBC off for a system that should
be periodic, especially a membrane.

-Dan
On Wed, Dec 5, 2018 at 11:12 AM Stejskal, Lenka
<lenka.stejskal.15.ucl.ac.uk> wrote:
>
> Dear Dan,
>
>
> Thank you very much for your answer.
>
>
> Lower down is pasted the file CHARMM GUI prepared for me.
>
> The waters are recognised, I checked that.
>
>
> During minimization it doesnt seem to select for periodic boundary conditions, do I need to correct that do you say?
>
>
> Thank you
>
>
> Lenka
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Received on Mon Dec 10 2018 - 07:00:03 PST
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