Re: [AMBER] TUTORIAL

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Mon, 3 Dec 2018 03:05:37 -0800

Aha, my mistake: argument $2 refers to TIP3PBOX. Try 'list' in leap to
see what box units are available.

When leap runs, it creates a leap.log file in the current directory.



On 12/3/18 2:53 AM, Charu Sharma (JRF) wrote:
> what is that ?i am following tutorial?
>
> On Mon, Dec 3, 2018 at 4:16 PM Bill Ross <ross.cgl.ucsf.edu> wrote:
>
>> Show your leap.log, please (copy/paste). Did you create it in an earlier
>> session?
>>
>>
>> On 12/3/18 2:34 AM, Charu Sharma (JRF) wrote:
>>> sir i have created
>>>
>>> On Mon, Dec 3, 2018 at 3:56 PM Bill Ross <ross.cgl.ucsf.edu> wrote:
>>>
>>>> You haven't created a 'dna1' to add ions to.
>>>>
>>>> Bill
>>>>
>>>> <div>-------- Original message --------</div><div>From: "Charu Sharma
>>>> (JRF)" <charu.sharma.lnmiit.ac.in> </div><div>Date:12/03/2018 1:54 AM
>>>> (GMT-08:00) </div><div>To: AMBER.ambermd.org,
>> amber-subscribe.ambermd.org
>>>> </div><div>Subject: [AMBER] TUTORIAL </div><div>
>>>> </div>Respected LL,
>>>> i HAVE A QUERY WHY DOES THIS KIND ERROR ARE COMING?
>>>>
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Received on Mon Dec 03 2018 - 03:30:03 PST
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