Dear Matias,
I forgot to source bashrc, after adding the line. After sourcing it, its
running properly. Thank you so much for your kind help.
Best,
Shilpa T
On Fri, Aug 3, 2018 at 5:45 PM, Sushi Shilpa <sushishilpa.gmail.com> wrote:
> Dear Matias,
>
> Thank you so much for your reply, I will check and let you know.
>
>
> Best,
>
> Shilpa T
>
> On Fri, Aug 3, 2018 at 5:44 PM, Sushi Shilpa <sushishilpa.gmail.com>
> wrote:
>
>> Hi,
>>
>> Root, I have permission
>>
>> On Fri, Aug 3, 2018 at 5:38 PM, Matias Machado <mmachado.pasteur.edu.uy>
>> wrote:
>>
>>> Other hints...
>>>
>>> do you have the right permissions to do it?
>>> are you as installing as sudoer or root?
>>>
>>> Best,
>>>
>>> Matias
>>>
>>> ----- Mensaje original -----
>>> De: "Matias Machado" <mmachado.pasteur.edu.uy>
>>> Para: "AMBER Mailing List" <amber.ambermd.org>
>>> Enviados: Viernes, 3 de Agosto 2018 9:04:44
>>> Asunto: Re: [AMBER] Amber16 Installation error
>>>
>>> Dear Sushi,
>>>
>>> So, the common hints would be...
>>>
>>> in which shell are you are running?
>>> have you sourced the .barshrc after adding the line? [
>>> http://archive.ambermd.org/201707/0326.html]
>>> are you using a custom python installation? [
>>> http://archive.ambermd.org/201709/0142.html]
>>> have you checked your PYTHONPATH? [http://archive.ambermd.org/20
>>> 1709/0141.html]
>>>
>>> Best,
>>>
>>> Matias
>>>
>>> ----- Mensaje original -----
>>> De: "Sushi Shilpa" <sushishilpa.gmail.com>
>>> Para: "AMBER Mailing List" <amber.ambermd.org>
>>> Enviados: Viernes, 3 de Agosto 2018 8:44:20
>>> Asunto: Re: [AMBER] Amber16 Installation error
>>>
>>> Dear Matias,
>>>
>>> I have checked, since I am new to the AMBER, I couldn't get proper
>>> solution, if you can solve this, could you please write in details.
>>>
>>>
>>> Best
>>>
>>> Shilpa T
>>>
>>> On Fri, Aug 3, 2018 at 5:08 PM, Matias Machado <mmachado.pasteur.edu.uy>
>>> wrote:
>>>
>>> > Dear Sushi,
>>> >
>>> > Have you check carefully these posts from the mailing list?
>>> >
>>> > http://archive.ambermd.org/201707/0309.html
>>> > http://archive.ambermd.org/201709/0142.html
>>> >
>>> > Best,
>>> >
>>> > Matias
>>> >
>>> > ------------------------------------
>>> > PhD.
>>> > Researcher at Biomolecular Simulations Lab.
>>> > Institut Pasteur de Montevideo | Uruguay
>>> > [http://pasteur.uy/en/laboratorios-eng/lsbm]
>>> > [http://www.sirahff.com]
>>> >
>>> > ----- Mensaje original -----
>>> > De: "Sushi Shilpa" <sushishilpa.gmail.com>
>>> > Para: "AMBER Mailing List" <AMBER.ambermd.org>
>>> > Enviados: Viernes, 3 de Agosto 2018 7:46:33
>>> > Asunto: [AMBER] Amber16 Installation error
>>> >
>>> > Dear Amber users,
>>> >
>>> >
>>> > I am installing Amber16 and Amber ools 17, I have followed the steps ./
>>> > configure gnu, then make install, while running make test. I am
>>> getting an
>>> > error message given below.
>>> >
>>> > make[1]: Entering directory
>>> > `/home/kavya/Documents/shilpa/amber16/AmberTools/test'
>>> > ./test_at_serial.sh
>>> > Error: Could not import Amber Python modules!
>>> > Probably your Amber Python environment was not set up correctly.
>>> >
>>> > We recommend adding the line:
>>> >
>>> > test -f /home/kavya/Documents/shilpa/amber16/amber.sh && source
>>> > /home/kavya/Documents/shilpa/amber16/amber.sh (sh/bash/zsh)
>>> > or
>>> > test -f /home/kavya/Documents/shilpa/amber16/amber.csh && source
>>> > /home/kavya/Documents/shilpa/amber16/amber.csh (csh/tcsh)
>>> >
>>> > to your login shell resource file (e.g., ~/.bashrc or ~/.cshrc).
>>> > make[1]: *** [test] Error 1
>>> > make[1]: Leaving directory
>>> > `/home/kavya/Documents/shilpa/amber16/AmberTools/test'
>>> > make: *** [test.serial] Error 2
>>> >
>>> >
>>> > I have added these lines and I have searched for the answer in the
>>> amber
>>> > mailing list but couldn't solve the issue.
>>> >
>>> > Please help me to solve this issue.
>>> >
>>> >
>>> > Sincerely,
>>> >
>>> > Shilpa T
>>> > _______________________________________________
>>> > AMBER mailing list
>>> > AMBER.ambermd.org
>>> > http://lists.ambermd.org/mailman/listinfo/amber
>>> >
>>> > _______________________________________________
>>> > AMBER mailing list
>>> > AMBER.ambermd.org
>>> > http://lists.ambermd.org/mailman/listinfo/amber
>>> >
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>
>>> _______________________________________________
>>> AMBER mailing list
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>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>
>>
>>
>
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Received on Sat Aug 04 2018 - 00:00:02 PDT
