Dear Amber users
I have performed the h-bond analysis. In my h-bond Gnuplot, I have the same
residue multiple interactions with the same atom of ligand. For example,
heme-OAD(oxygen) interact with R116. On the y-axis, I have 3 interactions
like heme.OAD -R116.H1
heme.OAD -R116.H2
heme.OAD -R116.H3
My question is that, can I have only 1 entry on the y-axis for this
particular interaction that represents the combine h1,h2,h3 fractional
occupancy rather than showing all atoms interaction of R116.
Kind Regards
On Wed, Jun 20, 2018 at 10:37 PM Rana Rehan Khalid <rrkhalid.umich.edu>
wrote:
> Dear Amber users
>
> I have performed h-bond analysis. In my h-bond gnuplot I have same
> residue multiple interaction with same atom of ligand. For example
> heme-OAD(oxygen) interact with R116. On y axis I have 3 interactions like
> heme.OAD -R116.H1
> heme.OAD -R116.H2
> heme.OAD -R116.H3
> My question is that, can I have only 1 entry on y axis for this particular
> interaction that represents the combine h1,h2,h3 fractional occupancy
> rather then showing all atoms interaction of R116.
>
> Kind Regards
>
>
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Received on Thu Jun 21 2018 - 08:30:02 PDT
