[AMBER] Converting atom naming to GLYCAM

From: senal dinuka <senal.ichemc.edu.lk>
Date: Tue, 5 Jun 2018 14:20:11 +0530

Dear all,

I have a cyanogenic glycoside as my ligand which is in sybyl atom typing. I
thought of using glycam forcefield employed in amber18 to model this
ligand. I really appreciate if anyone can point me in the direction of a
tool where I can convert my structure to GLYCAM naming to comply with
forcefield.

Regards, 
-- 
D L Senal Dinuka
Grad.Chem., A.I.Chem.C.
Research Assistant
College of Chemical Sciences
Institute of Chemistry Ceylon
Rajagiriya
Sri Lanka
+94 77 627 4678
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Jun 05 2018 - 02:00:01 PDT
Custom Search