hi,
I have not tested but can you try following this?
http://archive.ambermd.org/201608/0163.html
Hai
On Thu, Jan 18, 2018 at 12:12 AM, Yuliana Bosken <ydavi002.ucr.edu> wrote:
> Hi,
> It's my first time using Amber 16 and I am not sure how to parameterize
> crystal water. I tried the leaprc.water.tip3p, I tried gaff2 and I also
> tried frcmod.ionsjc_tip3p. None of them worked and I can't save the prmtop
> file
>
> FATAL: Atom .R<HOH 457>.A<O 1> does not have a type.
> FATAL: Atom .R<HOH 458>.A<O 1> does not have a type.
> FATAL: Atom .R<HOH 459>.A<O 1> does not have a type.
> FATAL: Atom .R<HOH 460>.A<O 1> does not have a type.
> FATAL: Atom .R<HOH 461>.A<O 1> does not have a type.
> Failed to generate parameters
> Parameter file was not saved.
>
> Could you please help me with this.
> Thank you
> --
> Yuliana Bosken
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Received on Wed Jan 17 2018 - 22:30:02 PST
