yes sir program is stop.
On Mon, Nov 13, 2017 at 4:33 PM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> Do you see the cpu in use from the program?
>
> $ top
>
> Bill
>
>
> On 11/13/17 3:32 AM, Rana Rehan Khalid wrote:
> > No its not stop . One maybe issue i am not sure that I ran the simulation
> > on amber 14 which is install on our cluster while in my laptop it is
> amber
> > 17 and I start analysis on my laptop. Thanks
> >
> > On Mon, Nov 13, 2017 at 4:26 PM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> >
> >> Did the program stop? Was there any other output?
> >>
> >> Bill
> >>
> >>
> >> On 11/13/17 3:24 AM, Rana Rehan Khalid wrote:
> >>> Dear Amber users
> >>>
> >>> I am facing this error. I have just started the analysis on my mdcrd
> >> files
> >>> and face this issue kindly guide how can i resolve it. I already run
> the
> >> 20
> >>> ns simulation and now start its analysis when i open the first file
> these
> >>> warning messages show.
> >>>
> >>> parm bay.prmtop
> >>> Reading 'bay.prmtop' as Amber Topology
> >>> Radius Set: modified Bondi radii (mbondi)
> >>>> trajin md1.mdcrd.gz
> >>> Reading 'md1.mdcrd.gz' as Amber Trajectory
> >>> Warning: md1.mdcrd.gz: Number of frames in compressed traj could not be
> >>> determined.
> >>> Warning: Frames will be read until EOF.
> >>>> list
> >>> trajin
> >>>
> >>>
> >>> INPUT TRAJECTORIES (1 total):
> >>> 0: 'md1.mdcrd.gz' is an AMBER trajectory, Parm bay.prmtop
> (Orthogonal
> >>> box), unknown #frames, start=0 offset=1
> >>> Total number of frames is unknown.
> >>>
> >>> Regards
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> >>
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Received on Mon Nov 13 2017 - 04:30:02 PST
