No its not stop . One maybe issue i am not sure that I ran the simulation
on amber 14 which is install on our cluster while in my laptop it is amber
17 and I start analysis on my laptop. Thanks
On Mon, Nov 13, 2017 at 4:26 PM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> Did the program stop? Was there any other output?
>
> Bill
>
>
> On 11/13/17 3:24 AM, Rana Rehan Khalid wrote:
> > Dear Amber users
> >
> > I am facing this error. I have just started the analysis on my mdcrd
> files
> > and face this issue kindly guide how can i resolve it. I already run the
> 20
> > ns simulation and now start its analysis when i open the first file these
> > warning messages show.
> >
> > parm bay.prmtop
> > Reading 'bay.prmtop' as Amber Topology
> > Radius Set: modified Bondi radii (mbondi)
> >> trajin md1.mdcrd.gz
> > Reading 'md1.mdcrd.gz' as Amber Trajectory
> > Warning: md1.mdcrd.gz: Number of frames in compressed traj could not be
> > determined.
> > Warning: Frames will be read until EOF.
> >> list
> > trajin
> >
> >
> > INPUT TRAJECTORIES (1 total):
> > 0: 'md1.mdcrd.gz' is an AMBER trajectory, Parm bay.prmtop (Orthogonal
> > box), unknown #frames, start=0 offset=1
> > Total number of frames is unknown.
> >
> > Regards
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>
>
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Received on Mon Nov 13 2017 - 04:00:03 PST
