Re: [AMBER] cpptraj error

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Mon, 13 Nov 2017 03:26:42 -0800

Did the program stop? Was there any other output?

Bill


On 11/13/17 3:24 AM, Rana Rehan Khalid wrote:
> Dear Amber users
>
> I am facing this error. I have just started the analysis on my mdcrd files
> and face this issue kindly guide how can i resolve it. I already run the 20
> ns simulation and now start its analysis when i open the first file these
> warning messages show.
>
> parm bay.prmtop
> Reading 'bay.prmtop' as Amber Topology
> Radius Set: modified Bondi radii (mbondi)
>> trajin md1.mdcrd.gz
> Reading 'md1.mdcrd.gz' as Amber Trajectory
> Warning: md1.mdcrd.gz: Number of frames in compressed traj could not be
> determined.
> Warning: Frames will be read until EOF.
>> list
> trajin
>
>
> INPUT TRAJECTORIES (1 total):
> 0: 'md1.mdcrd.gz' is an AMBER trajectory, Parm bay.prmtop (Orthogonal
> box), unknown #frames, start=0 offset=1
> Total number of frames is unknown.
>
> Regards
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Received on Mon Nov 13 2017 - 03:30:03 PST
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