Re: [AMBER] AmberTools 17 incomplete compilation

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Mon, 18 Sep 2017 08:41:02 -0400

It's not clear what you mean by "incomplete" - we need more
information to help. Are the commands not there? Do they not run or
crash in some way? What were the exact commands you ran (for
configure, make, etc)?

-Dan

On Mon, Sep 18, 2017 at 8:31 AM, D L S Dinuka <senal.ichemc.edu.lk> wrote:
> Dear Amber users,
>
> I have been trying to compile AmberTools17 with Amber16 engine on Ubuntu 16.04 platform. I followed the exact procedure as mentioned in wiki by Jason to compile Amber(serial)
> http://jswails.wikidot.com/installing-amber14-and-ambertools14
> As far as the test runs and compile log shows everything is successful with no errors. I have also ran 100 ns of production successfully via pmemd so the engine works. But when I check ParmEd, Parmchk2, and ambpdb files they are incomplete. What can be the cause?
>
> Thankyou
>
> D L Senal Dinuka
> Graduate Chemist (ICHEMC)
> +94 77 627 4678
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber



-- 
-------------------------
Daniel R. Roe
Laboratory of Computational Biology
National Institutes of Health, NHLBI
5635 Fishers Ln, Rm T900
Rockville MD, 20852
https://www.lobos.nih.gov/lcb
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Received on Mon Sep 18 2017 - 06:00:16 PDT
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