Looking deeper, that may not be the critical problem, since other places
checked are more amber-specific:
> /usr/local/amber16/lib/tcl8.5 /usr/local/amber16/library
You could look in those places for more relevant clues. Noting you are using system dirs for your amber install, that raises the possibility that the user may forget to run with permissions during the install, so it might be incomplete.
On 7/12/17 4:02 PM, Bill Ross wrote:
> Hi Kristin,
>
> Try
>
> $ env
>
> and see if there are any clues. Probably a variable with a name
> including LIB points there, and from that we may reason backwards from
> general principles, absent expert help.
>
> Bill
>
>
> On 7/12/17 3:55 PM, Krantzman, Kristin D wrote:
>> Hi Bill,
>> Python is automatically installed when I type "make install" with AmberTools16. I do not know how to find the configuration file that has the error.
>> Kristin
>>
>> -----Original Message-----
>> From: Bill Ross [mailto:ross.cgl.ucsf.edu]
>> Sent: Wednesday, July 12, 2017 6:45 PM
>> To: amber.ambermd.org
>> Subject: Re: [AMBER] Problem with running mdout_analyzer.py
>>
>> Correction - not a broken install, but a broken config that is concatenating names instead of choosing one.
>>
>> Bill
>>
>>
>> On 7/12/17 3:43 PM, Bill Ross wrote:
>>> > /opt/anaconda1anaconda2anaconda3/lib/tcl8.5
>>>
>>> That path sure looks like a broken install, but I don't know anything
>>> about anaconda.
>>>
>>> Bill
>>>
>>> On 7/12/17 3:40 PM, Krantzman, Kristin D wrote:
>>>> Greetings AMBER users,
>>>> I am trying to run mdout_analyzer.py and get the following error:
>>>> Traceback (most recent call last):
>>>> File "./mdout_analyzer.py", line 48, in <module>
>>>> root = Tk()
>>>> File "/usr/local/amber16/miniconda/lib/python2.7/lib-tk/Tkinter.py", line 1820, in __init__
>>>> self.tk = _tkinter.create(screenName, baseName, className,
>>>> interactive, wantobjects, useTk, sync, use)
>>>> _tkinter.TclError: Can't find a usable init.tcl in the following directories:
>>>> /opt/anaconda1anaconda2anaconda3/lib/tcl8.5
>>>> /usr/local/amber16/lib/tcl8.5 /usr/local/lib/tcl8.5 /usr/local/amber16/library /usr/local/library /usr/local/tcl8.5.18/library /usr/tcl8.5.18/library I reinstalled tcl, I still get this error. Could you help with this?
>>>> Best, Kristin
>>>>
>>>>
>>>> This probably means that Tcl wasn't installed properly.
>>>> Kristin D. Krantzman
>>>> Professor, Department of Chemistry and Biochemistry College of
>>>> Charleston Charleston, SC 29424
>>>> (843) 953-3378
>>>>
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Received on Wed Jul 12 2017 - 16:30:04 PDT
