Dear Amber team and active members.
I am thankful for your prompt reply and suggestions. I guess, the issue
was more of memory related.
I recently installed an SSD-drive (for some other purpose) and I don't get
similar issue anymore. All my jobs (4 independent jobs on 54 GPUs ) are
running fine.
Thanks again for your help.
Best,
Hirdesh
**
********************************************
On Sun, Jul 9, 2017 at 6:41 PM, Dow Hurst <dphurst.uncg.edu> wrote:
> Hirdesh,
> Maestro can use a lot of video ram if ribbons display quality is set to
> maximum. I remember troubleshooting why part of a protein wouldn't display
> in ribbons on a workstation with a quadro card that had very limited ram.
> Resetting the ribbon quality to the lowest setting recovered the ribbon
> display to the full protein. It is possible other settings such as
> full-antialiasing or ambient occlusion could contribute to video ram
> consumption, but I haven't tested that myself.
>
> Sincerely,
> Dow
> ⚛Dow Hurst, Research Scientist
> 340 Sullivan Science Bldg.
> Dept. of Chem. and Biochem.
> University of North Carolina at Greensboro
> PO Box 26170 Greensboro, NC 27402-6170
>
>
> On Fri, Jul 7, 2017 at 1:28 PM, Hirdesh Kumar <hirdesh.iitd.gmail.com>
> wrote:
>
> > Hi All,
> >
> > I am using my EXXACT system ( 4 GPUs : GTX1080) to submit my Amber16
> jobs.
> > (Operating system: Ubuntu 16).
> >
> > In this system, whenever I use GUI to do some other task my amber jobs
> get
> > killed. I believe, GUI is randomly using any of these 4 GPUs.
> >
> > Please let me know how can I get rid of this issue.
> >
> > Thanks,
> > Hirdesh
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
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Received on Mon Jul 10 2017 - 10:00:03 PDT
