i follow the amber tutorial 2017 for installation i also have amber 16
install and on the same directory i extract the amber 17 which i think
extract on the same amber 16 directory configure gnu on ubuntu 16.1
On Thu, Jul 6, 2017 at 2:37 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> What configure instructions did you use? On what operating system?
>
> Bill
>
>
> On 7/5/17 11:35 PM, Rana Rehan Khalid wrote:
> > nergy_Sander.cpp: In member function ‘void
> > Energy_Sander::SetDefaultInput()’:
> > Energy_Sander.cpp:128:10: error: ‘struct sander_input’ has no member
> named
> > ‘ibelly’
> > input_.ibelly = 0;
> > ^
> > Energy_Sander.cpp:131:10: error: ‘struct sander_input’ has no member
> named
> > ‘bellymask’
> > input_.bellymask[0] = '\0';
> > ^
> > Energy_Sander.cpp:132:10: error: ‘struct sander_input’ has no member
> named
> > ‘refc’
> > input_.refc[0] = '\0';
> > ^
> > <builtin>: recipe for target 'Energy_Sander.o' failed
> > make[4]: *** [Energy_Sander.o] Error 1
> > make[4]: Leaving directory
> > '/home/rehan/Downloads/amber16/AmberTools/src/cpptraj/src'
> > Makefile:10: recipe for target 'install' failed
> > make[3]: *** [install] Error 2
> > make[3]: Leaving directory
> > '/home/rehan/Downloads/amber16/AmberTools/src/cpptraj'
> > Makefile:482: recipe for target 'build_cpptraj' failed
> > make[2]: *** [build_cpptraj] Error 2
> > make[2]: Leaving directory '/home/rehan/Downloads/
> amber16/AmberTools/src'
> > Makefile:17: recipe for target 'serial' failed
> > make[1]: *** [serial] Error 2
> > make[1]: Leaving directory '/home/rehan/Downloads/
> amber16/AmberTools/src'
> > Makefile:7: recipe for target 'install' failed
> > make: *** [install] Error 2
> >
> > On Thu, Jul 6, 2017 at 2:33 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> >
> >> Look at test output for problems, rather than compile warnings.
> >>
> >> Bill
> >>
> >>
> >> On 7/5/17 11:31 PM, Rana Rehan Khalid wrote:
> >>> is the warning messages during installation common or there is some
> >> problem
> >>> in installation ??
> >>>
> >>> On Thu, Jul 6, 2017 at 1:34 AM, Hai Nguyen <nhai.qn.gmail.com> wrote:
> >>>
> >>>> Have you read the amber 17 manual about install yet? If yes, which
> part
> >> you
> >>>> are not clear?
> >>>>
> >>>> Hai
> >>>>
> >>>> On Thu, Jul 6, 2017 at 1:22 AM Rana Rehan Khalid <rrkhalid.umich.edu>
> >>>> wrote:
> >>>>
> >>>>> is it better i delete the first one and install new one??
> >>>>>
> >>>>>
> >>>>> On Thu, Jul 6, 2017 at 1:11 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> >>>>>
> >>>>>> Install side-by-side, unless you want to debug deeply, is my
> >>>> suggestion.
> >>>>>> Bill
> >>>>>>
> >>>>>>
> >>>>>> On 7/5/17 10:09 PM, Rana Rehan Khalid wrote:
> >>>>>>> I already Have Amber 16 but now i want to install amber 17 over it
> >>>>> kindly
> >>>>>>> guide me i download the amber 17
> >>>>>>>
> >>>>>>> i also try to update the amber 16 but may be some file missing
> after
> >>>>>> update
> >>>>>>> kindly guide me thanks
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Received on Thu Jul 06 2017 - 00:00:04 PDT
