Re: [AMBER] Amber Installation

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Wed, 5 Jul 2017 23:37:39 -0700

What configure instructions did you use? On what operating system?

Bill


On 7/5/17 11:35 PM, Rana Rehan Khalid wrote:
> nergy_Sander.cpp: In member function ‘void
> Energy_Sander::SetDefaultInput()’:
> Energy_Sander.cpp:128:10: error: ‘struct sander_input’ has no member named
> ‘ibelly’
> input_.ibelly = 0;
> ^
> Energy_Sander.cpp:131:10: error: ‘struct sander_input’ has no member named
> ‘bellymask’
> input_.bellymask[0] = '\0';
> ^
> Energy_Sander.cpp:132:10: error: ‘struct sander_input’ has no member named
> ‘refc’
> input_.refc[0] = '\0';
> ^
> <builtin>: recipe for target 'Energy_Sander.o' failed
> make[4]: *** [Energy_Sander.o] Error 1
> make[4]: Leaving directory
> '/home/rehan/Downloads/amber16/AmberTools/src/cpptraj/src'
> Makefile:10: recipe for target 'install' failed
> make[3]: *** [install] Error 2
> make[3]: Leaving directory
> '/home/rehan/Downloads/amber16/AmberTools/src/cpptraj'
> Makefile:482: recipe for target 'build_cpptraj' failed
> make[2]: *** [build_cpptraj] Error 2
> make[2]: Leaving directory '/home/rehan/Downloads/amber16/AmberTools/src'
> Makefile:17: recipe for target 'serial' failed
> make[1]: *** [serial] Error 2
> make[1]: Leaving directory '/home/rehan/Downloads/amber16/AmberTools/src'
> Makefile:7: recipe for target 'install' failed
> make: *** [install] Error 2
>
> On Thu, Jul 6, 2017 at 2:33 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:
>
>> Look at test output for problems, rather than compile warnings.
>>
>> Bill
>>
>>
>> On 7/5/17 11:31 PM, Rana Rehan Khalid wrote:
>>> is the warning messages during installation common or there is some
>> problem
>>> in installation ??
>>>
>>> On Thu, Jul 6, 2017 at 1:34 AM, Hai Nguyen <nhai.qn.gmail.com> wrote:
>>>
>>>> Have you read the amber 17 manual about install yet? If yes, which part
>> you
>>>> are not clear?
>>>>
>>>> Hai
>>>>
>>>> On Thu, Jul 6, 2017 at 1:22 AM Rana Rehan Khalid <rrkhalid.umich.edu>
>>>> wrote:
>>>>
>>>>> is it better i delete the first one and install new one??
>>>>>
>>>>>
>>>>> On Thu, Jul 6, 2017 at 1:11 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:
>>>>>
>>>>>> Install side-by-side, unless you want to debug deeply, is my
>>>> suggestion.
>>>>>> Bill
>>>>>>
>>>>>>
>>>>>> On 7/5/17 10:09 PM, Rana Rehan Khalid wrote:
>>>>>>> I already Have Amber 16 but now i want to install amber 17 over it
>>>>> kindly
>>>>>>> guide me i download the amber 17
>>>>>>>
>>>>>>> i also try to update the amber 16 but may be some file missing after
>>>>>> update
>>>>>>> kindly guide me thanks
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Received on Thu Jul 06 2017 - 00:00:04 PDT
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