Re: [AMBER] Amber Installation

From: Rana Rehan Khalid <rrkhalid.umich.edu>
Date: Thu, 6 Jul 2017 02:35:18 -0400

nergy_Sander.cpp: In member function ‘void
Energy_Sander::SetDefaultInput()’:
Energy_Sander.cpp:128:10: error: ‘struct sander_input’ has no member named
‘ibelly’
   input_.ibelly = 0;
          ^
Energy_Sander.cpp:131:10: error: ‘struct sander_input’ has no member named
‘bellymask’
   input_.bellymask[0] = '\0';
          ^
Energy_Sander.cpp:132:10: error: ‘struct sander_input’ has no member named
‘refc’
   input_.refc[0] = '\0';
          ^
<builtin>: recipe for target 'Energy_Sander.o' failed
make[4]: *** [Energy_Sander.o] Error 1
make[4]: Leaving directory
'/home/rehan/Downloads/amber16/AmberTools/src/cpptraj/src'
Makefile:10: recipe for target 'install' failed
make[3]: *** [install] Error 2
make[3]: Leaving directory
'/home/rehan/Downloads/amber16/AmberTools/src/cpptraj'
Makefile:482: recipe for target 'build_cpptraj' failed
make[2]: *** [build_cpptraj] Error 2
make[2]: Leaving directory '/home/rehan/Downloads/amber16/AmberTools/src'
Makefile:17: recipe for target 'serial' failed
make[1]: *** [serial] Error 2
make[1]: Leaving directory '/home/rehan/Downloads/amber16/AmberTools/src'
Makefile:7: recipe for target 'install' failed
make: *** [install] Error 2

On Thu, Jul 6, 2017 at 2:33 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:

> Look at test output for problems, rather than compile warnings.
>
> Bill
>
>
> On 7/5/17 11:31 PM, Rana Rehan Khalid wrote:
> > is the warning messages during installation common or there is some
> problem
> > in installation ??
> >
> > On Thu, Jul 6, 2017 at 1:34 AM, Hai Nguyen <nhai.qn.gmail.com> wrote:
> >
> >> Have you read the amber 17 manual about install yet? If yes, which part
> you
> >> are not clear?
> >>
> >> Hai
> >>
> >> On Thu, Jul 6, 2017 at 1:22 AM Rana Rehan Khalid <rrkhalid.umich.edu>
> >> wrote:
> >>
> >>> is it better i delete the first one and install new one??
> >>>
> >>>
> >>> On Thu, Jul 6, 2017 at 1:11 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> >>>
> >>>> Install side-by-side, unless you want to debug deeply, is my
> >> suggestion.
> >>>> Bill
> >>>>
> >>>>
> >>>> On 7/5/17 10:09 PM, Rana Rehan Khalid wrote:
> >>>>> I already Have Amber 16 but now i want to install amber 17 over it
> >>> kindly
> >>>>> guide me i download the amber 17
> >>>>>
> >>>>> i also try to update the amber 16 but may be some file missing after
> >>>> update
> >>>>> kindly guide me thanks
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Received on Thu Jul 06 2017 - 00:00:03 PDT
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