Hi David:
I used ./configure clang -macAccelerate for the configure script during the installation. “Which gcc” gives “/usr/bin/gcc” and “gcc -v” gives:
Configured with: --prefix=/Library/Developer/CommandLineTools/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 8.1.0 (clang-802.0.42)
Target: x86_64-apple-darwin16.6.0
Thread model: posix
InstalledDir: /Library/Developer/CommandLineTools/usr/bin
After running configure with -debug option, the same error messages remained and no new information was generated. I’m not sure if this is specific for AmberTools17 because it’s the only one I have installed. I could try using a different version later. The MacOS I’m using is Sierra 10.12.5.
Thanks for the help!
Andy Liu
> On Jun 21, 2017, at 2:45 PM, David A Case <david.case.rutgers.edu> wrote:
>
> On Wed, Jun 21, 2017, Xichong Liu wrote:
>>
>> I have recently installed AmberTools17 on my personal MacBook and ran
>> into some issues with Leap.
>
> Thanks for the report. What options did you give to the configure script?
> What is the result of the commands "which gcc" and "gcc -v"? Finally,
> what version of MacOS are you using?
>
> This sounds like a tough thing to debug until someone else has a machine
> on which the tleap tests fail in this manner. You can try this:
>
> Re-run configure with the "-debug" option; recompile; then see what happens
> on one of the tleap test cases. It may work then; or you may get more
> information; or you may not learn anything useful.
>
> (Aside: do you know if this is specific to AmberTools17? That is, have
> you run an earlier version of AmberTools using this machine and compilers?)
>
> ...dac
>
>
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Received on Wed Jun 21 2017 - 07:00:05 PDT
