Re: [AMBER] "Abort trap 6" error message with tLeap and xLeap

From: David A Case <david.case.rutgers.edu>
Date: Wed, 21 Jun 2017 08:45:24 -0400

On Wed, Jun 21, 2017, Xichong Liu wrote:
>
> I have recently installed AmberTools17 on my personal MacBook and ran
> into some issues with Leap.

Thanks for the report. What options did you give to the configure script?
What is the result of the commands "which gcc" and "gcc -v"? Finally,
what version of MacOS are you using?

This sounds like a tough thing to debug until someone else has a machine
on which the tleap tests fail in this manner. You can try this:

Re-run configure with the "-debug" option; recompile; then see what happens
on one of the tleap test cases. It may work then; or you may get more
information; or you may not learn anything useful.

(Aside: do you know if this is specific to AmberTools17? That is, have
you run an earlier version of AmberTools using this machine and compilers?)

...dac


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Received on Wed Jun 21 2017 - 06:00:14 PDT
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