Dr. Case, and Saeid
Thanks so much for the reply.
Regards
Ramin
Sent from my Windows Phone
________________________________
From: David A Case<mailto:david.case.rutgers.edu>
Sent: ý5/ý31/ý2017 7:26 AM
To: AMBER Mailing List<mailto:amber.ambermd.org>
Subject: Re: [AMBER] Citation for frcmod.parmbsc0, frcmod.ionsjc_tip3p
On Wed, May 31, 2017, Ramin Salimi wrote:
> Do we need to make citation for using frcmod.parmbsc0, and
> frcmod.ionsjc_tip3p?
It's polite to do so; references are given in Chap 3 of the Amber Reference
Manual. In practice, this step is often skipped.
>
> It is my first time citing amber, and all the used elements in it, Could
> you please inform me if I need to cite any things other than Amber
> itself, and the forcefield(s) used?
Unless you are using some special feature (say, self-guided Langevin dynamics,
or similar), it should not generally be necessary to provide a citation for
all the components that go into a modern MD simulation. Citing the program
and the force fields should be sufficient.
....dac
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Received on Wed May 31 2017 - 06:00:04 PDT
