[AMBER] glycoprotein

From: Neha Gandhi <n.gandhiau.gmail.com>
Date: Tue, 2 May 2017 16:49:10 +1000

Dear List,

I am using the glycoprotein builder from the glycam website. I want to use
this structure in AMBER.

When I use the downloaded structure in AMBER, tleap will immediately add
hydrogen to the aminoacid i.e. Serine which is connected to the sugar

What is the correct way to add glyco-peptide linkage in AMBER?

Many thanks,
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Received on Tue May 02 2017 - 00:00:03 PDT
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