Hi all,
I tried running ./update_amber --upgrade and get the following output
[root.neon amber16]# ./update_amber --upgrade
You are about to perform a major upgrade. This is NOT reversible.
Do you wish to continue? (y/N) y
Downloading updates for AmberTools 16
Downloading AmberTools 16/update.21 (1.14 KB)
Applying AmberTools 16/update.21
Downloading updates for Amber 16
Downloading Amber 16/update.7 (1.42 KB)
Applying Amber 16/update.7
If the upgrade attempt fails, or you have made any custom changes
to the AmberTools source code, please download the AmberTools17
tarball from
http://ambermd.org/AmberTools17-get.html
NOTE: This upgrade cannot be reversed!
Downloading upgrade.patch.bz2 (2.49 MB)
Downloading: [::::::::::::::::::::::::::::::::::::::::::::::::::] 100.0%
Done.
Attempting the upgrade. Please wait...
Finalizing the upgrade
Downloading Upgrade Finalizer (87.14 KB)
Deleting old files
Downloading the new files archive
Downloading upgrade.tar.bz2 (61.85 MB)
Downloading: [::::::::::::::::::::::::::::::::::::::::::::::::::] 100.0%
Done.
Traceback (most recent call last):
File "./upgrade", line 1062, in <module>
with tarfile.open(os.path.join('.', 'upgrade.tar.bz2'),'r:bz2') as tar:
AttributeError: 'TarFile' object has no attribute '__exit__'
Warning: Possible error detected in upgrade...
And now there is a upgrade.tar.bz2 file hanging around in my $AMBERHOME
directory, and starting cpptraj is still showing
CPPTRAJ: Trajectory Analysis. V16.16
I have not made any custom changes to the AmberTools source code.
Thanks,
Joe
------
Joseph Baker, PhD
Assistant Professor
Department of Chemistry
C101 Science Complex
The College of New Jersey
Ewing, NJ 08628
Phone: (609) 771-3173
Web: http://bakerj.pages.tcnj.edu/
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Apr 21 2017 - 12:00:02 PDT
