Dear Hai,
After adding "source $AMBERHOME/amber.sh" in .bash_profile, it works
properly.
Thank you very much for your suggestion.
Best Regards,
Khatcharin
2017-04-21 9:15 GMT+07:00 Hai Nguyen <nhai.qn.gmail.com>:
> you need to add
>
> source $AMBERHOME/amber.sh to your .bash_profile.
>
> (You said you did set AMBERHOME and PATH but you did not say you set
> "LD_LIBRARY_PATH")
>
> The test passed because you did source amber.sh
>
> Hai
>
> On Thu, Apr 20, 2017 at 10:13 PM, Khatcharin Siriwong <
> khatcharin.s.gmail.com> wrote:
>
> > Dear All,
> >
> > I have installed AmberTools17 on Ubuntu with bash shell.
> > - $AMBERHOME was set, and "source amber.sh" was done after "./configure
> > gnu"
> > - Everything was fine for make install and make test (there was no any
> > error and failed, for both serial and parallel installation)
> > - there are libsander.so and libnetcdf.so in $AMBERHOME/lib
> > - I also set AMBERHOME and PATH in file ".bash_profile" as same as other
> > softwares (no .bashrc file)
> >
> > But when I run cpptraj or cpptraj.MPI, I got message
> >
> > "cpptraj: error while loading shared libraries: libsander.so: cannot open
> > shared object file: No such file or directory"
> >
> > also
> >
> > "cpptraj.MPI: error while loading shared libraries: libnetcdf.so.7:
> cannot
> > open shared object file: No such file or directory"
> >
> > I also installed on CentOS, but only cpptraj.MPI works properly.
> >
> > Please give me any suggestion. Thank you very much in advance for your
> > kindness.
> >
> > Best Regards,
> > Khatcharin
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Apr 20 2017 - 19:30:04 PDT
