On Sat, Mar 18, 2017 at 10:19 PM, Vasantha Kumar <vin.vasanth.gmail.com>
wrote:
> Dear Bill
>
> I have also tried to install amber 16, everything runs wells, in the end I
> have following error related to "libsrim" with the make install. Therefore
> I would highly appreciate your suggestion and comments related to with this
> issue.
>
> With many thanks
> Vince
>
> Error in installing amber 16
> ===================
>
>
> depend:169: recipe for target 'getopts_c.o' failed
>
Can you try to follow this this thread:
http://archive.ambermd.org/201612/0124.html
(search for "text/plain attachment: getopts.patch
<
http://archive.ambermd.org/201612/att-0124/getopts.patch>" in that thread)
Hai
> make[3]: *** [getopts_c.o] Error 1
> make[3]: Leaving directory '/home/J55/Programs/amber16/
> AmberTools/src/rism'
> Makefile:475: recipe for target 'librism' failed
> make[2]: *** [librism] Error 2
> make[2]: Leaving directory
> '/home/J55/Programs/amber16/AmberTools/src/sander'
> Makefile:17: recipe for target 'serial' failed
> make[1]: *** [serial] Error 2
> make[1]: Leaving directory '/home/J55/Programs/amber16/AmberTools/src'
> Makefile:7: recipe for target 'install' failed
> make: *** [install] Error 2
>
>
>
>
> On Sat, Mar 18, 2017 at 10:12 PM, Vasantha Kumar <vin.vasanth.gmail.com>
> wrote:
>
> > Dear David
> >
> > I have tried to comment the mtkpp in makefile.. it works but in the end
> it
> > shows problem with "chamber". If I disable chamber again it will give
> error
> > with "reduce". I don't know what's going on. Its same software which
> worked
> > well on 32bit computer. Is there is a way to check necessary library
> > requirement is matched or not tun run Amber.
> >
> > Thanks
> > Vince
> >
> >
> > On Sat, Mar 18, 2017 at 11:22 AM, David Case <david.case.rutgers.edu>
> > wrote:
> >
> >> On Sat, Mar 18, 2017, Vasantha Kumar wrote:
> >> >
> >> > I m trying to install Amber12 with Amber-tool13 on a Fedora 25 64bit
> >> laptop
> >> > with intel support. I can run ./configure gnu, everything goes well,
> but
> >> > when I run "make install or make -j install" it shows an error with
> >> mtkpp.
> >>
> >> > I have tried to run "./configure -nomtkpp gnu" still I have the same
> >> > problem.
> >>
> >> This is odd. Look carefully at the output from configure -nomtkpp. The
> >> point
> >> of the -nomtkpp is to skip the mtkpp step. An alternative is to edit
> >> $AMBERHOME/AmberTools/src/Makefile, and comment out the line that
> >> compiles
> >> mtkpp.
> >>
> >> ....good luck....dac
> >>
> >>
> >> _______________________________________________
> >> AMBER mailing list
> >> AMBER.ambermd.org
> >> http://lists.ambermd.org/mailman/listinfo/amber
> >>
> >
> >
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Received on Sat Mar 18 2017 - 23:30:03 PDT
