Re: [AMBER] strip inpcrd

From: Saman Yousuf ali <>
Date: Tue, 31 Jan 2017 10:46:44 +0000 (UTC)

 Thanks for your help. It works.

    On Tuesday, January 31, 2017 2:33 PM, Elvis Martis <> wrote:

 Instead try parmed
Follow these steps
Parmed <for amber14  or 12
Parm xyz.prmtop
loadRestrt xyz.inpcrd
strip :WAT,Na+
parmout xyz_dry.prmtop xyz_dry.inpcrd

    Best Regards

Elvis Martis
Ph.D. Student (Computational Chemistry)
 at Bombay College of Pharmacy

A  Kalina, Santacruz [E], Mumbai 400098, INDIA
Skype. adrian_elvis12

-----Original Message-----
From: Saman Yousuf ali []
Sent: Tuesday, January 31, 2017 2:29 PM
To: AMBER Mailing List <>
Subject: [AMBER] strip inpcrd

Dear all,
I want to strip water and sodium ion from inpcrd file via cpptraj. Kindly help me. _______________________________________________
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Received on Tue Jan 31 2017 - 03:00:02 PST
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