antechamber tutorial :
http://ambermd.org/tutorials/basic/tutorial4b/
On Sat, Jan 14, 2017 at 2:10 PM, asdda asa <nadaafiva.gmail.com> wrote:
> Dear Jing,
> Thanks for your help.
> Can you details the steps that I should perform?
> I really don't how to proceed.
>
> Sincerely,
> nadaafiva
>
> On Sat, Jan 14, 2017 at 7:36 PM, Huang Jing <jing.huang8911.gmail.com>
> wrote:
>
> > Use antechamber to set the parameter for modified residues;
> > Jing
> >
> > On Sat, Jan 14, 2017 at 11:12 AM, asdda asa <nadaafiva.gmail.com> wrote:
> >
> > > Dear Amber users,
> > >
> > > I am dealing with DNA topoisomerase I (pdb id 1K4T) which contain
> > modified
> > > residues TGP and PTR. I am not sure how to handle those two residues in
> > > Leap module.
> > >
> > > Thanks for any help.
> > >
> > >
> > >
> > > nadaafiva
> > > _______________________________________________
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> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> >
> >
> >
> > --
> > ----------------------
> > Dr. Jing Huang
> > *Institute of Chemistry and the Lise Meitner-Minerva Center for
> > Computational Quantum*
> > *Chemistry, Hebrew University of Jerusalem, Givat Ram Campus, Jerusalem
> > 91904, Israel*
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
----------------------
Dr. Jing Huang
*Institute of Chemistry and the Lise Meitner-Minerva Center for
Computational Quantum*
*Chemistry, Hebrew University of Jerusalem, Givat Ram Campus, Jerusalem
91904, Israel*
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Received on Sat Jan 14 2017 - 04:30:03 PST
