Dear Jing,
Thanks so much for you kindness.
It is clear now.
Best regards,
nadaafiva
On Sat, Jan 14, 2017 at 8:26 PM, Huang Jing <jing.huang8911.gmail.com>
wrote:
> antechamber tutorial :
> http://ambermd.org/tutorials/basic/tutorial4b/
>
> On Sat, Jan 14, 2017 at 2:10 PM, asdda asa <nadaafiva.gmail.com> wrote:
>
> > Dear Jing,
> > Thanks for your help.
> > Can you details the steps that I should perform?
> > I really don't how to proceed.
> >
> > Sincerely,
> > nadaafiva
> >
> > On Sat, Jan 14, 2017 at 7:36 PM, Huang Jing <jing.huang8911.gmail.com>
> > wrote:
> >
> > > Use antechamber to set the parameter for modified residues;
> > > Jing
> > >
> > > On Sat, Jan 14, 2017 at 11:12 AM, asdda asa <nadaafiva.gmail.com>
> wrote:
> > >
> > > > Dear Amber users,
> > > >
> > > > I am dealing with DNA topoisomerase I (pdb id 1K4T) which contain
> > > modified
> > > > residues TGP and PTR. I am not sure how to handle those two residues
> in
> > > > Leap module.
> > > >
> > > > Thanks for any help.
> > > >
> > > >
> > > >
> > > > nadaafiva
> > > > _______________________________________________
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> > > > AMBER.ambermd.org
> > > > http://lists.ambermd.org/mailman/listinfo/amber
> > > >
> > >
> > >
> > >
> > > --
> > > ----------------------
> > > Dr. Jing Huang
> > > *Institute of Chemistry and the Lise Meitner-Minerva Center for
> > > Computational Quantum*
> > > *Chemistry, Hebrew University of Jerusalem, Givat Ram Campus, Jerusalem
> > > 91904, Israel*
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> ----------------------
> Dr. Jing Huang
> *Institute of Chemistry and the Lise Meitner-Minerva Center for
> Computational Quantum*
> *Chemistry, Hebrew University of Jerusalem, Givat Ram Campus, Jerusalem
> 91904, Israel*
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Sat Jan 14 2017 - 05:00:02 PST
