Respected Sir,
Thank you very much for your reply. I am little confused with another issue,
Can I use autoimaged trajectory for this?
Sorry to bother you again and again.
Regards.
On Tue, Dec 13, 2016 at 7:14 PM, Daniel Roe <daniel.r.roe.gmail.com> wrote:
> The 'minimage' command of cpptraj will calculate the minimum non-self
> imaged distance between atoms. See the manual for details.
>
> -Dan
>
> On Tue, Dec 13, 2016 at 8:39 AM, A kS <aks25121986.gmail.com> wrote:
> > Dear AMBER users,
> >
> > I am a new user of AMBER. It will be great if anyone could give me an
> idea
> > about how can I calculate the minimum distance between images of solute
> > during the simulation.
> >
> > If such calculation is possible then can I use autoimaged trajectory for
> > this?
> >
> > Looking forward for your reply.
> >
> > Regards
> > _______________________________________________
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> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
>
>
>
> --
> -------------------------
> Daniel R. Roe
> Laboratory of Computational Biology
> National Institutes of Health, NHLBI
> 5635 Fishers Ln, Rm T900
> Rockville MD, 20852
> https://www.lobos.nih.gov/lcb
>
> _______________________________________________
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> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Tue Dec 13 2016 - 06:00:04 PST
