[AMBER] update error of Amber16 and Tools

From: jacky zhao <jackyzhao010.gmail.com>
Date: Tue, 18 Oct 2016 09:44:44 +0800

Hi everyone,

  When I am updating amber16 and ambertools in my workstation, I come
across the error. The information was attached below:


  Thank you for taking your time.


[user.localhost amber16]$ ./update_amber --update

Preparing to apply updates... please wait.

Applying AmberTools 16/update.1

Applying AmberTools 16/update.2

Applying AmberTools 16/update.3

Applying AmberTools 16/update.4

Applying AmberTools 16/update.5

Applying AmberTools 16/update.6

Applying AmberTools 16/update.7

Applying AmberTools 16/update.8

Applying AmberTools 16/update.9

/home/user/amber16/updateutils/patch.py:298: PatchingWarning: Previously
applied patch detected. Skipping.

  PatchingWarning)

/home/user/amber16/updateutils/patch.py:334: PatchingWarning: Permissions
not found for every file in
.patches/AmberTools16_Unapplied_Patches/update.9. All new files will be
read-only!

  'files will be read-only!') % self.name, PatchingWarning)

Applying AmberTools 16/update.10

Applying AmberTools 16/update.11

Applying AmberTools 16/update.12

Applying AmberTools 16/update.13

Applying AmberTools 16/update.14

Applying AmberTools 16/update.15

Applying Amber 16/update.1

Applying Amber 16/update.2

Applying Amber 16/update.3

Applying Amber 16/update.4

/home/user/amber16/updateutils/patch.py:334: PatchingWarning: Permissions
not found for every file in .patches/Amber16_Unapplied_Patches/update.4.
All new files will be read-only!

  'files will be read-only!') % self.name, PatchingWarning)

Applying Amber 16/update.5


NOTE: update_amber only updates the raw source code! You must recompile if
you want

      any changes to take effect!
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Received on Mon Oct 17 2016 - 19:00:02 PDT
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