Dear Amber Users
There are two different nonbonded parameters for sigma and epsilon in gaff2
and gaff force field.
gaff2 ho 0.3019 0.0047
gaff ho 0.0000 0.0000
Which gaff parameter is good for this ligand, where ho is bound with
Oxygen, see below
R1
|
O
|
O=P - O - H
|
O
|
R2
Thanks in advanced
Regards
Rahman
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Received on Thu Jun 30 2016 - 11:30:02 PDT
