Dear Aishani,
If you import your trajectory into VMD it is possible to export it as PDB (including just one frame) by using the File-->Save Coordinates... option.
Vinícius Wilian D Cruzeiro
PhD Student
Department of Chemistry, Physical Chemistry Division
University of Florida, United States
Voice: +1(352)846-1633
________________________________
From: Aishani Prem <aishaniprem.gmail.com>
Sent: Monday, June 20, 2016 2:31:12 PM
To: AMBER Mailing List
Subject: [AMBER] Saving the coordinates during a simulation
Hello,
I was wondering if there is a way to save the coordinates to a pdb
file at a certain point during the simulation?
--
Thank You and Regards,
Aishani Chittoor Prem
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Received on Mon Jun 20 2016 - 12:00:04 PDT
