Re: [AMBER] Radial Distribution Function

From: Angelina Malagodi <angelinamalagodi.gmail.com>
Date: Mon, 13 Jun 2016 11:50:39 -0600

Okay, but is there a way to compare my first 10 nano seconds to say my last
90ns without separating my trajectories into segments?

On Mon, Jun 13, 2016 at 11:44 AM, Daniel Roe <daniel.r.roe.gmail.com> wrote:

> If you processed 1000 frames, the RDF that is output is calculated
> from all 1000 frames.
>
> -Dan
>
> On Mon, Jun 13, 2016 at 11:38 AM, Angelina Malagodi
> <angelinamalagodi.gmail.com> wrote:
> > To whom this may concern:
> >
> > I have been doing radial distribution functions using a 1000 frame
> > trajectory. My results don't indicate if the results are a average over
> all
> > of the frames or a single frame. Thank you so much!
> >
> > Sincerely,
> >
> > Angelina Malagodi
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
>
>
>
> --
> -------------------------
> Daniel R. Roe, PhD
> Department of Medicinal Chemistry
> University of Utah
> 30 South 2000 East, Room 307
> Salt Lake City, UT 84112-5820
> http://home.chpc.utah.edu/~cheatham/
> (801) 587-9652
> (801) 585-6208 (Fax)
>
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> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Mon Jun 13 2016 - 11:00:03 PDT
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