[AMBER] Choose reference frame for rmsd

From: Jean-Patrick Francoia <jeanpatrick.francoia.gmail.com>
Date: Mon, 13 Jun 2016 14:55:31 +0200

Hello,

I have about 20 coordinates files I load into cpptraj with the trajin
command. Each file contains 1000 frames.

I would like to perform a rmsd, something like:


rms first mass out rms.agr


However in this command, the first frame is used as the reference. How
can I set, let's say, frame #1456 as the reference ?


Best regards


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Received on Mon Jun 13 2016 - 06:00:03 PDT
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